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Doctors have discussed the health benefits of fasting and how it can help us in learning to manage our diets. At times, doctors even prescribe fasting for various reasons. Without a doubt, these are at most secondary benefits of fasting. The same can be said for the physical benefits of prayer, pilgrimage, and other aspects of formal worship.

Still, the real reason that a Muslim does any of these things is for the sake of worshipping and obeying Allah. He would do so even if there were no health benefits. Indeed, were it proven to be injurious to his health, he would still do so. However, Allah never commands us to do anything that would harm us in the least except when the benefits of doing so far outweigh the harm.

http://www.islamtoday.net/english/showme2.cfm?cat_id=29&sub_cat_id=713